Responsabilités collectives

• Co-organisatrice du groupe de vulgarisation scientifique 'Donneurs de Sciences' depuis 2018
• Co-organisatrice du colloque EEID2020 (https://www.eeidconference2020.org/)
• Co-animatrice du groupe thématique “Ecologie et Evolution des Zoonoses” (2015-2020)
• Co-animatrice du Plateau de Biologie moléculaire du CBGP (2016-2019)
• Membre nommée de la CSS BPE de l’INRA (2013-2020)
• Membre élue du conseil scientifique du département EFPA de l’INRA (2012-2015; 2016-2020)
• Membre nommée de la CSS3 ‘Sciences des systèmes écologiques’ de l’IRD et membre de la délégation permanente (2012-2015)
• Référente de l'ED GAIA pour les thèses des filières BDI et EERGP (2011-2015)

Activités éditoriales

• Membre éditorial de Nature Scientific Report
• Relectrice d’articles pour Evolution; Genetics; Infection, Genetics and Evolution; Journal of Animal Ecology; Molecular Ecology; Functional Ecology; Proceedings of the Royal Society...

Enseignement

• Immunoécologie ; Coinfections (Master 2, université Montpellier)
• Génétique des populations (Montpellier SupAgro)

Publications récentes

ResearcherID: B-2601-2013
https://orcid.org/0000-0002-7907-6539

* Abbate, J., Galan, M., Razzauti, M., Sironen, T., Voutilainen, L., Henttonen, H., Gasqui, P., Cosson, J. F. and Charbonnel, N. (Submitted). Pathogen community composition and co-infection patterns in a wild community of rodents. PCI Ecology. doi: 10.1101/2020.02.09.940494.

* Charbonnel, N., Galan, M., Tatard, C., Loiseau, A., Diagne, C. A., Dalecky, A., Parrinello, H., Rialle, S., Severac, D. and Brouat, C. (In_Revision). Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal. Nature Scientific Reports. doi: 10.1101/442160.

* Quéméré, E., Hessenauer, P., Galan, M., Fernandez, M., Merlet, J., Chaval, Y., Verheyden, H., Hewison, A. J. M., Morellet, N., Gilot-Fromont, E. and Charbonnel, N. (In revision). Fluctuating pathogen-mediated selection drives the maintenance of innate immune gene polymorphism in a widespread wild ungulate. doi: 10.1101/458216.

* Tournayre, O., Leuchtmann, M., Filippi-Codaccion, O., Trillat, M., Piry, S., Pontier, D., Charbonnel, N. and Galan, M. (In revision). In silico and empirical evaluation of twelve COI & 16S metabarcoding primer sets for insectivorous bat diet analysis. Ecology and Evolution. doi: 10.1101/742874.

* Fevola, C. et al. (In press). Geographical distribution of Ljungan virus in small mammals in Europe. Vector Borne and Zoonotic Diseases.

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* Madrières, S., Castel, G., Murri, S., Vulin, J., Marianneau, P. and Charbonnel, N. (2019). The needs for developing experiments on reservoirs in hantavirus research : accomplishments, challenges and promises for the future. Viruses-Basel, 11. doi:10.3390/v11070664.

* Tournayre, O., Pons, J. B., Leuchtmann, M., Leblois, R., Piry, S., Filippi-Codaccion, O., Loiseau, A., Duhayer, J., Garin, I., Mathews, F., Puechmaille, S., Pontier, D. and Charbonnel, N. (2019). Integrating population genetics to define conservation units from the core to the edge of Rhinolophus ferrumequinum Western range. Ecology and Evolution, 9, 12272–12290. doi: 10.1002/ece3.5714.

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* Dubois, A., Castel, G., Murri, S., Pulido, C., Pons, J. B., Benoit, L., Loiseau, A., Lakhdar, L., Galan, M., Marianneau, P. and Charbonnel, N. (2018). Bank vole immunoheterogeneity may limit nephropatia epidemica emergence in a French non-endemic region. Parasitology, 145, 393–407. doi: 10.1017/S0031182017001548.

* Galan, M., Pons, J. B., Tournayre, O., Pierre, E., Leuchtmann, M., Pontier, D. and Charbonnel, N. (2018). Metabarcoding for the parallel identification of several hundred predators and their preys: application to bat species diet analysis. Molecular ecology resources, 18, 474-489. doi: 10.1111/1755-0998.12749.

* Rohfritsch, A., Galan, M., Gautier, M., Gharbi, K., Olsson, G. E., Gschloessl, B., Zeimes, C., VanWambeke, S., Vitalis, R. and Charbonnel, N. (2018). Preliminary insights into the genetics of bank vole tolerance to Puumala hantavirus in Sweden. Ecology and Evolution, 8, 11273–11292. doi:10.1002/ece3.4603.

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* Diagne, C. A., Charbonnel, N., Henttonen, H., Sironen, T. and Brouat, C. (2017a). Serological survey of zoonotic viruses in invasive and native commensal rodents in Senegal, West Africa. Vector Borne and Zoonotic Diseases, 17, 730-733. doi: 10.1089/vbz.2017.2135.

* Diagne, C. A., Galan, M., Tamisier, L., D'Ambrosio, J., Dalecky, A., Bâ, K., Kane, M., Niang, Y., Diallo, M., Sow, A., Tatard, C., Loiseau, a., Fossati, O., Sembene, M., Cosson, J. F., Charbonnel, N. and Brouat, C. (2017b). Ecological and sanitary impacts of bacterial communities associated to biological invasions in African commensal rodent communities. Nature Scientific Report, 7, 14995. doi: doi:10.1038/s41598-017-14880-1.

* Dubois, A., Castel, G., Murri, S., Pulido, C., Pons, J. B., Benoit, L., Loiseau, A., Lakhdar, L., Galan, M., Charbonnel, N. and Marianneau, P. (2017a). Experimental infections of wild bank voles (Myodes glareolus) from nephropatia epidemica endemic and non-endemic regions revealed slight differences in Puumala virological course and immunological responses. Virus research, 235, 67-72. doi: 10.1016/j.virusres.2017.04.004.

* Dubois, A., Galan, M., Cosson, J. F., Gauffre, B., Henttonen, H., Nieminaa, J., Razzauti, M., Voutilainen, L., Vitalis, R., Guivier, E. and Charbonnel, N. (2017b). Microevolution of Bank Voles (Myodes glareolus) at Neutral and Immune-Related Genes During a Multi-Annual Complete Dynamic Cycle : consequences for Puumala hantavirus epidemiology. Infection Genetics and Evolution, 49, 318–329. doi: 10.1016/j.meegid.2016.12.007.

* Diagne, C. A., Gilot-Fromont, E., Cornet, S., Husse, L., Doucouré, S., Dalecky, A., Bâ, K., Kane, M., Niang, Y., Diallo, M., Sow, A., Fossati-Gaschignard, O., Piry, S., Artige, E., Sembene, M., Brouat, C. and Charbonnel, N. (2017c). Contemporary variations of immune responsiveness during range expansion of two invasive rodents in Senegal. Oikos, 126, 435-446. doi: 10.1111/oik.03470.

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* Cornet, S., Brouat, C., Diagne, C. A. and Charbonnel, N. (2016). EcoImmunology and bioinvasion: revisiting the EICA hypotheses. Evolutionary applications, 9, 952–962. doi:10.1111/eva.12406.

* Diagne, C. A., Ribas Salvador, A., Charbonnel, N., Dalecky, A., Tatard, C., Gauthier, P., Haukisalmi, V., Fossati, O., Bâ, K., Kane, M., Niang, Y., Diallo, M., Sow, A., Piry, S., Sembene, M. and Brouat, C. (2016). Parasites and invasions: changes in gastrointestinal helminth assemblages in invasive and native rodents in Senegal. International Journal Parasitology, 46, 857–869. doi:10.1016/j.ijpara.2016.07.007.

* Galan, M., Razzauti, M., Bard, E., Brouat, C., Charbonnel, N., Dehne-Garcia, A., Loiseau, A., Tatard, C., Vignes, H., Vayssier-Taussat, M. and Cosson, J. F. (2016). 16S rRNA amplicon sequencing for epidemiological surveys of bacteria in wildlife. mSystems, 1, e00032-00016. doi:10.1128/mSystems.00032-16.